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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849834.1_cds_XP_016510955.1_23743
CDS Infomation

[gene=LOC107828197] [db_xref=GeneID:107828197] [protein=spermidine synthase-like] [protein_id=XP_016510955.1] [location=complement(join(220685..220750,220884..221016,221607..221802,221886..221957,222067..222139,222463..222567,222887..223009,223120..223196,223902..224079))] [gbkey=CDS]
Sequence

ATGGCAGAGGAGTGTGCAGCATTTGTATTGCCTGTGAAGAGACCAAGAGAAGAGGAACAA
CAACAGGAAGAGATGGAAGCAGCCAACCACAACAACGACAACGGTTGCACCAATGAGTCT
CCTTATATCTCTTCTGTTCTTCCTGGCTGGTTCTCTGAGATTAGCCCCCTTTGGCCTGGG
GAAGCACACTCGTTGAAGGTTGAGAAGATATTGTTTCAAGGGAAGTCTGATTACCAGAAT
GTCATGGTTTTTCAGTCATCAACTTATGGAAAGGTGCTTGTTTTGGATGGTGTGATTCAA
CTCACAGAGAGGGATGAATGTGCTTACCAAGAGATGATCGCTCATCTTCCTCTTTGTTCA
ATTCCAAATCCCAAAAAGGTGCTGGTTATTGGAGGAGGAGATGGTGGTGTCTTGCGTGAG
GTGTCACGTCATTCTTCTGTCGAGCAGATTGACATATGTGAGATTGACAAGATGGTAGTT
GAGGTTTCTAAACAATTTTTCCCAGATGTAGCTGTAGGATACGAGGATCCACGTGTTAAT
CTCCACATTGGTGATGGAGTTGCATTTTTGAAAAATGTTGCTGCAGGAACTTACGATGCT
GTCATAGTGGATTCATCTGACCCTATAGGTCCAGCACAAGAGTTGTTCGAAAAGCCTTTC
TTTGATTCTATAGCAAGAGCTCTGCGTCCAGGAGGGGTTGTATCTACACAGGCTGAGAGT
ATATGGCTTCACATGCACATAATTGAAGAAATCGTTGCCAATTGCCGCCAAATCTTCAAA
GGCTCAGTTAACTATGCATGGACTACAGTTCCTACTTATCCAAGTGGTATGATTGGTTTC
ATGCTCTGCTCTACTGAGGGACCTGCAGTTGATTTCAAGAACCCAATTAACCCCATCGAT
GACGACGATGACAGCCATACCAAAACTCTTGGACCTTTGAAGTTTTACAACTCTGAGCTT
CACAAAGCATCATTCTGTTTGCCATCATTTGCCAAGAGGGTGATTGAATCCAAAGGAAAA
TGA

Peptide Sequence

PEP ID

XP_016510955.1
PEP Infomation

PREDICTED: spermidine synthase-like [Nicotiana tabacum]
Sequence

MAEECAAFVLPVKRPREEEQQQEEMEAANHNNDNGCTNESPYISSVLPGWFSEISPLWPG
EAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCS
IPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVSKQFFPDVAVGYEDPRVN
LHIGDGVAFLKNVAAGTYDAVIVDSSDPIGPAQELFEKPFFDSIARALRPGGVVSTQAES
IWLHMHIIEEIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKNPINPID
DDDDSHTKTLGPLKFYNSELHKASFCLPSFAKRVIESKGK

Transcript Sequence

Gene sequence data has not been registered.